Human Topoisomerase IIα Molecular Modeling Repository (HTopo2MMR)

Drugs/Agents acting at Etoposide-Binding Site

Sr.No. HT2MMR ID SMILE Notation Download Reference
1 HT2LIG000001 C[C@H]1O[C@@H]2[C@H](CO1)O[C@@H]([C@H](O)[C@@H]2O)O[C@H]1[C@H]2COC(=O)[C@@H]2[C@H](c2cc(c(O)c(c2)OC)OC)c2cc3c(cc12)OCO3 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
2 HT2LIG000002 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](O)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
3 HT2LIG000003 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@@H](O)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
4 HT2LIG000004 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](N)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
5 HT2LIG000005 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@@H](N)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
6 HT2LIG000006 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](NCCO)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
7 HT2LIG000008 CCCN[C@H]1[C@H]2COC(=O)[C@@H]2[C@H](c2cc(OC)c(O)c(OC)c2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
8 HT2LIG000009 COCCN[C@H]1[C@H]2COC(=O)[C@@H]2[C@H](c2cc(OC)c(O)c(OC)c2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
9 HT2LIG000010 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](NCC=C)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
10 HT2LIG000011 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](NCC(C)O)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
11 HT2LIG000012 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](NC(C)CO)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
12 HT2LIG000013 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](NCCCO)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1989,52,3,606
13 HT2LIG000014 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(F)cc2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
14 HT2LIG000015 COc1cc(cc(O)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(F)cc2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
15 HT2LIG000016 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(F)cc2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
16 HT2LIG000017 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(cc2)C(F)(F)F)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
17 HT2LIG000018 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2cc(cc(c2)[N+](=O)[O-])[N+](=O)[O-])c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
18 HT2LIG000020 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2cccc(F)c2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
19 HT2LIG000021 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccccc2F)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
20 HT2LIG000023 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2cc(F)cc(F)c2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
21 HT2LIG000024 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2cc(F)cc(F)c2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
22 HT2LIG000025 COC(=O)c1ccc(N[C@H]2[C@H]3COC(=O)[C@@H]3[C@H](C3=CC(=O)C(=O)C(=C3)OC)c3cc4OCOc4cc23)cc1O PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
23 HT2LIG000026 COC(=O)c1ccc(N[C@H]2[C@H]3COC(=O)[C@@H]3[C@H](c3cc(OC)c(O)c(OC)c3)c3cc4OCOc4cc23)cc1O PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
24 HT2LIG000028 COC(=O)c1cccc(N[C@H]2[C@H]3COC(=O)[C@@H]3[C@H](c3cc(O)c(O)c(OC)c3)c3cc4OCOc4cc23)c1 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
25 HT2LIG000029 COC(=O)c1cccc(N[C@H]2[C@H]3COC(=O)[C@@H]3[C@H](c3cc(OC)c(O)c(OC)c3)c3cc4OCOc4cc23)c1 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
26 HT2LIG000031 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2cccc(Br)c2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
27 HT2LIG000038 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2cncc3ccccc23)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
28 HT2LIG000039 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccccc2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
29 HT2LIG000040 COc1cc(cc(O)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccccc2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
30 HT2LIG000041 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccccc2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
31 HT2LIG000042 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(Cl)cc2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
32 HT2LIG000046 COc1cc(cc(O)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(cc2)C#N)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
33 HT2LIG000049 COc1cc(cc(O)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(cc2)C(=O)C)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
34 HT2LIG000050 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(CC#N)cc2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
35 HT2LIG000051 COc1cc(cc(O)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(CC#N)cc2)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
36 HT2LIG000055 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)C(=O)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
37 HT2LIG000056 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@@H](O)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
38 HT2LIG000059 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](O)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
39 HT2LIG000062 COC1=CC(=CC(=O)C1=O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(cc2)[N+](=O)[O-])c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
40 HT2LIG000063 COc1cc(cc(O)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(cc2)[N+](=O)[O-])c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
41 HT2LIG000064 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](Nc2ccc(cc2)[N+](=O)[O-])c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
42 HT2LIG000065 CCOC(=O)c1ccc(N[C@H]2[C@H]3COC(=O)[C@@H]3[C@H](C3=CC(=O)C(=O)C(=C3)OC)c3cc4OCOc4cc23)cc1 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
43 HT2LIG000066 CCOC(=O)c1ccc(N[C@H]2[C@H]3COC(=O)[C@@H]3[C@H](c3cc(OC)c(O)c(OC)c3)c3cc4OCOc4cc23)cc1 PDB | SDF | MOL2 J. Nat. Prod.,1992,55,8,1100
44 HT2LIG000101 Cc1c2C=CN(Cc2c(C)c2c3ccccc3[nH]c12)C(=O)NCCCCCCNC(=O)C[C@]1(O)CC[C@H]2[C@@H]3CCc4cc(O)ccc4[C@H]3CC[C@]12C PDB | SDF | MOL2 J. Med. Chem.,1996,39,17,3367
45 HT2LIG000152 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2C(COC2=O)[C@H](OC(=O)NCCN(C)C)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Med. Chem.,2005,48,2,593
46 HT2LIG000153 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2C(COC2=O)[C@H](OC(=O)N(C)CCN(C)C)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Med. Chem.,2005,48,2,593
47 HT2LIG000154 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2C(COC2=O)[C@H](OC(=O)NCCCN(C)C)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Med. Chem.,2005,48,2,593
48 HT2LIG000156 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2C(COC2=O)[C@H](OC(=O)NCCCN)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Med. Chem.,2005,48,2,593
49 HT2LIG000158 COc1cc(cc(OC)c1O)[C@H]1[C@H]2COC(=O)[C@@H]2[C@H](OC(=O)NCCN(C)C)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Med. Chem.,2005,48,2,593
50 HT2LIG000160 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2C(COC2=O)[C@H](OC(=O)NCCN)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Med. Chem.,2005,48,2,593
51 HT2LIG000164 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2C(COC2=O)[C@H](CCN(C)CCN(C)C)c2cc3OCOc3cc12 PDB | SDF | MOL2 J. Med. Chem.,2005,48,2,593
52 HT2LIG000348 CC(=C)[C@@H]1CC[C@@]2(CC[C@]3(C)[C@H](CC[C@@H]4[C@@]5(C)CC[C@H](O)C(C)(C)[C@@H]5CC[C@@]34C)[C@@H]12)C(=S)O PDB | SDF | MOL2 J. Nat. Prod.,2009,72,9,1643
53 HT2LIG000349 COc1ccc(cc1)P(=S)(S)O[C@H]1CC[C@@]2(C)[C@@H](CC[C@]3(C)[C@@H]2CC[C@@H]2[C@H]4[C@@H](CC[C@@]4(CC[C@@]32C)C(=S)O)C(=C)C)C1(C)C PDB | SDF | MOL2 J. Nat. Prod.,2009,72,9,1643
54 HT2LIG000352 CC(=C)[C@@H]1CC[C@@]2(CC[C@]3(C)[C@H](CC[C@@H]4[C@@]5(C)CC[C@H](OC(=O)NCc6ccccc6)C(C)(C)[C@@H]5CC[C@@]34C)[C@@H]12)C(=O)O PDB | SDF | MOL2 J. Nat. Prod.,2009,72,9,1643
55 HT2LIG000353 CC(=C)[C@@H]1CC[C@@]2(CC[C@]3(C)[C@H](CC[C@@H]4[C@@]5(C)CC[C@H](OC(=O)NS(=O)(=O)c6ccccc6)C(C)(C)[C@@H]5CC[C@@]34C)[C@@H]12)C(=O)NS(=O)(=O)c1ccccc1 PDB | SDF | MOL2 J. Nat. Prod.,2009,72,9,1643
56 HT2LIG000354 CC(=C)[C@@H]1CC[C@@]2(CC[C@]3(C)[C@H](CC[C@@H]4[C@@]5(C)CC[C@H](OC(=O)Nc6cccc7ccccc67)C(C)(C)[C@@H]5CC[C@@]34C)[C@@H]12)C(=O)O PDB | SDF | MOL2 J. Nat. Prod.,2009,72,9,1643
57 HT2LIG000355 CC(=C)[C@@H]1CC[C@@]2(CC[C@]3(C)[C@H](CC[C@@H]4[C@@]5(C)CC[C@H](OC(=O)Nc6ccc(cc6)c6ccccc6)C(C)(C)[C@@H]5CC[C@@]34C)[C@@H]12)C(=O)O PDB | SDF | MOL2 J. Nat. Prod.,2009,72,9,1643
58 HT2LIG000356 CC(=C)[C@@H]1CC[C@@]2(CC[C@]3(C)[C@H](CC[C@@H]4[C@@]5(C)CC[C@H](OC(=O)NCC=C)C(C)(C)[C@@H]5CC[C@@]34C)[C@@H]12)C(=O)O PDB | SDF | MOL2 J. Nat. Prod.,2009,72,9,1643
59 HT2LIG000357 CC(=C)[C@@H]1CC[C@@]2(CC[C@]3(C)[C@H](CC[C@@H]4[C@@]5(C)CC[C@H](OS(=O)(=O)c6ccccc6)C(C)(C)[C@@H]5CC[C@@]34C)[C@@H]12)C(=O)O PDB | SDF | MOL2 J. Nat. Prod.,2009,72,9,1643
60 HT2LIG000487 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](NC(=O)c2ccc(cc2)C2(N=N2)C(F)(F)F)c2cc3OCOc3cc12 PDB | SDF | MOL2 Bioorg. Med. Chem.,2010,18,2,830
61 HT2LIG001081 CCCC(C)C(=O)NCC(C)(C)CC1=C(O)C(=O)c2ccccc2C1=O PDB | SDF | MOL2 Eur. J. Med. Chem.,2013,60,,271
62 HT2LIG001082 CCCCCCCCCCCCCCCC(=O)NCC(C)(C)CC1=C(O)C(=O)c2ccccc2C1=O PDB | SDF | MOL2 Eur. J. Med. Chem.,2013,60,,271
63 HT2LIG001083 CCCC(C)C(=O)OCC(C)(C)CC1=C(O)C(=O)c2ccccc2C1=O PDB | SDF | MOL2 Eur. J. Med. Chem.,2013,60,,271
64 HT2LIG001084 CCCCCCCCCCCCCCCC(=O)OCC(C)(C)CC1=C(O)C(=O)c2ccccc2C1=O PDB | SDF | MOL2 Eur. J. Med. Chem.,2013,60,,271
65 HT2LIG001204 COC(=O)[C@@H]1[C@H](O)[C@H](O)[C@H](O)[C@@H](O1)Oc1c(cc(O)c(c1O)c1ccccc1)c1ccccc1 PDB | SDF | MOL2 Bioorg. Med. Chem. Lett.,2014,24,5,1362
66 HT2LIG001205 O=C(O)[C@@H]1[C@@H](O)[C@H](O)[C@H](O)[C@H](O1)Oc1cc(c2ccccc2)c(OC)c(O)c1c1ccccc1 PDB | SDF | MOL2 Bioorg. Med. Chem. Lett.,2014,24,5,1362
67 HT2LIG001206 O=C(O)[C@@H]1[C@@H](O)[C@@H](O)[C@@H](O)[C@H](O1)Oc1c(cc(O)c(c1O)c1ccccc1)c1ccccc1 PDB | SDF | MOL2 Bioorg. Med. Chem. Lett.,2014,24,5,1362
68 HT2LIG001220 COc1cc(cc(OC)c1O)[C@H]1[C@@H]2[C@H](COC2=O)[C@H](OC(=O)c2cnccn2)c2cc3OCOc3cc12 PDB | SDF | MOL2 Bioorg. Med. Chem.,2014,22,11,2998
HOME